User profiles for Carolyn J. Hogg

Carolyn Hogg

University of Sydney
Verified email at sydney.edu.au
Cited by 3114

The earth BioGenome project 2020: Starting the clock

…, D Haussler, KM Helgen, CJ Hogg… - Proceedings of the …, 2022 - National Acad Sciences
November 2020 marked 2 y since the launch of the Earth BioGenome Project (EBP), which
aims to sequence all known eukaryotic species in a 10-y timeframe. Since then, significant …

[HTML][HTML] Adaptation and conservation insights from the koala genome

…, Z Duda, MDB Eldridge, KM Ewart, CJ Hogg… - Nature …, 2018 - nature.com
The koala, the only extant species of the marsupial family Phascolarctidae, is classified as ‘vulnerable’
due to habitat loss and widespread disease. We sequenced the koala genome, …

[PDF][PDF] Incomplete lineage sorting and phenotypic evolution in marsupials

…, WE Johnson, H Yang, PA Brandies, CJ Hogg… - Cell, 2022 - cell.com
Incomplete lineage sorting (ILS) makes ancestral genetic polymorphisms persist during rapid
speciation events, inducing incongruences between gene trees and species trees. ILS has …

[HTML][HTML] The value of reference genomes in the conservation of threatened species

P Brandies, E Peel, CJ Hogg, K Belov - Genes, 2019 - mdpi.com
Conservation initiatives are now more crucial than ever—over a million plant and animal
species are at risk of extinction over the coming decades. The genetic management of …

Threatened Species Initiative: Empowering conservation action using genomic resources

CJ Hogg, K Ottewell, P Latch… - Proceedings of the …, 2022 - National Acad Sciences
Globally, 15,521 animal species are listed as threatened by the International Union for the
Conservation of Nature, and of these less than 3% have genomic resources that can inform …

A demonstration of conservation genomics for threatened species management

…, EA McLennan, K Belov, CJ Hogg… - Molecular Ecology …, 2020 - Wiley Online Library
As species extinction rates increase, genomics provides a powerful tool to support intensive
management of threatened species. We use the Tasmanian devil (Sarcophilus harrisii) to …

[HTML][HTML] Offspring survival changes over generations of captive breeding

KA Farquharson, CJ Hogg, CE Grueber - Nature Communications, 2021 - nature.com
Conservation breeding programs such as zoos play a major role in preventing extinction,
but their sustainability may be impeded by neutral and adaptive population genetic change. …

[HTML][HTML] From reference genomes to population genomics: comparing three reference-aligned reduced-representation sequencing pipelines in two wildlife species

…, KA Farquharson, EA McLennan, K Belov, CJ Hogg… - BMC genomics, 2019 - Springer
Background Recent advances in genomics have greatly increased research opportunities
for non-model species. For wildlife, a growing availability of reference genomes means that …

Fecal viral diversity of captive and wild Tasmanian devils characterized using virion-enriched metagenomics and metatranscriptomics

…, M Shi, CE Grueber, EC Holmes, CJ Hogg… - Journal of …, 2019 - Am Soc Microbiol
The Tasmanian devil is an endangered carnivorous marsupial threatened by devil facial
tumor disease (DFTD). While research on DFTD has been extensive, little is known about …

Extinct in the wild: The precarious state of Earth's most threatened group of species

…, SE Dalrymple, J Foster, TC Gilbert, CJ Hogg… - Science, 2023 - science.org
Extinct in the Wild (EW) species are placed at the highest risk of extinction under the International
Union for Conservation of Nature Red List, but the extent and variation in this risk have …